C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: male-specific lethal 1 homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577454 MSL1-004 ENSG00000188895 9606 + 17:40122573-40130293 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000577454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000577454 11.526±0.00 16.375±0.00 1.006±0.00 9.993±5.02 7.097±5.08 6.457±2.92 5.082±4.33 7.471±6.46 4.578±3.38 9.491±6.69 5.335±3.36 20.642±4.16 15.798±1.61 22.479±7.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002GG CIL_0002GG_0001 CGP 17:40092787-40136916
CIL_0007GO CIL_0007GO_0001 CGP 17:40122298-40172183

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0043984 IEA histone H4-K16 acetylation
GO:0072487 IEA MSL complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107485 Msl1-004 protein_coding Mus_musculus 0 3230
ENSMUST00000037915 Msl1-001 protein_coding Mus_musculus 0 2217
ENSMUST00000107487 Msl1-002 protein_coding Mus_musculus 0 2200
ENSMUST00000037930 Msl1-003 protein_coding Mus_musculus 0 977
ENSMUST00000126969 Msl1-005 protein_coding Mus_musculus 0 383

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