| Transcript ID | Breast | Colon | Muscle |
|---|---|---|---|
| ENSMUST00000107739 | 0.470±0.00 | 6.551±0.00 | 0.203±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | integrin alpha 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107739  |
Itga3-002 |
ENSMUSG00000001507 |
10090 | - |
11:95044474-95069198  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088W | CIL_00088W_0002 | VISTA | 11:94580928-95183811 |
| CIL_0007QJ | CIL_0007QJ_0002 | VISTA | 11:95039208-95641127 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001764 | IMP | neuron migration |
| GO:0005515 | IPI | protein binding |
| GO:0005886 | IDA | plasma membrane |
| GO:0007229 | IEA | integrin-mediated signaling pathway |
| GO:0007613 | IMP | memory |
| GO:0009897 | IDA | external side of plasma membrane |
| GO:0016323 | IDA | basolateral plasma membrane |
| GO:0031527 | ISS | filopodium membrane |
| GO:0035024 | IGI | negative regulation of Rho protein signal transduction |
| GO:0035640 | IGI | exploration behavior |
| GO:0043235 | ISO | receptor complex |
| GO:0044708 | IMP | single-organism behavior |
| GO:0045202 | IDA | synapse |
| GO:0046982 | ISS | protein heterodimerization activity |
| GO:0060076 | IDA | excitatory synapse |
| GO:0071438 | ISS | invadopodium membrane |
| GO:0090004 | ISS | positive regulation of establishment of protein localization to plasma membrane |
| GO:0097060 | IDA | synaptic membrane |
| GO:0097062 | IGI | dendritic spine maintenance |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000007722
|
ITGA3-020 | protein_coding | Homo_sapiens | 0 | 3031 |
|
ENST00000320031
|
ITGA3-001 | protein_coding | Homo_sapiens | 0 | 3513 |
|
ENST00000505306
|
ITGA3-002 | retained_intron | Homo_sapiens | 0 | 1941 |
|
ENST00000505612
|
ITGA3-013 | retained_intron | Homo_sapiens | 0 | 370 |
|
ENST00000506401
|
ITGA3-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1002 |
|
ENST00000506437
|
ITGA3-006 | retained_intron | Homo_sapiens | 0 | 673 |
|
ENST00000506827
|
ITGA3-014 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000507771
|
ITGA3-015 | retained_intron | Homo_sapiens | 0 | 309 |
|
ENST00000508100
|
ITGA3-009 | retained_intron | Homo_sapiens | 0 | 254 |
|
ENST00000510809
|
ITGA3-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 532 |
|
ENST00000514834
|
ITGA3-017 | retained_intron | Homo_sapiens | 0 | 503 |
|
ENST00000554408
|
RP11-1033H12.3-001 | processed_pseudogene | Homo_sapiens | 0 | 329 |
|
ENST00000570989
|
ITGA3-019 | retained_intron | Homo_sapiens | 3e-31 | 141 |
