C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506437 ITGA3-006 ENSG00000005884 9606 + 17:50086329-50090481 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverMuscleOvaryTestisENST00000506437
Transcript ID Brain Breast Kidney Liver Muscle Ovary Testis
ENST00000506437 1.261±0.00 0.693±0.00 0.028±0.00 0.775±0.69 0.092±0.00 1.811±0.00 0.539±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QJ CIL_0007QJ_0001 VISTA 17:49459872-50061823
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219
CIL_0004N5 CIL_0004N5_0002 CGP 17:49990005-50090481

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001548 Itga3-001 protein_coding Mus_musculus 0 673
ENSMUST00000107739 Itga3-002 protein_coding Mus_musculus 0 673

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