C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PNN interacting serine/arginine-rich
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108229 Pnisr-002 ENSMUSG00000028248 10090 + 4:21848058-21871342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108229
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108229 10.350±3.81 7.951±1.05 15.589±1.77 21.652±4.09 6.577±0.92 6.989±1.51 3.207±0.35 4.472±1.05 7.720±4.38 8.833±2.79 4.447±0.55 13.096±8.26 7.229±1.84 5.604±1.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133071 pnisr-006 retained_intron Danio_rerio 3e-32 145
ENST00000369239 PNISR-007 protein_coding Homo_sapiens 0 1546
ENST00000438806 PNISR-201 protein_coding Homo_sapiens 0 1546
ENST00000460600 PNISR-004 processed_transcript Homo_sapiens 0 451
ENST00000463021 PNISR-009 processed_transcript Homo_sapiens 0 416
ENST00000478777 PNISR-008 nonsense_mediated_decay Homo_sapiens 0 1919
ENST00000492294 PNISR-001 processed_transcript Homo_sapiens 0 438

Loading