C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chloride channel 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110302 Clcn3-006 ENSMUSG00000004319 10090 - 8:60911896-60954748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverTestisENSMUST00000110302
Transcript ID Heart Liver Testis
ENSMUST00000110302 1.282±0.08 1.797±0.00 1.582±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0006821 IEA chloride transport
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0034220 IEA ion transmembrane transport
GO:0044070 IEA regulation of anion transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123469 clcn3-203 protein_coding Danio_rerio 0 1197
ENST00000347613 CLCN3-002 protein_coding Homo_sapiens 0 3694
ENST00000360642 CLCN3-004 protein_coding Homo_sapiens 0 1980
ENST00000423965 CLCN3P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 638
ENST00000504131 CLCN3-201 protein_coding Homo_sapiens 0 3160
ENST00000507875 CLCN3-005 protein_coding Homo_sapiens 0 3195
ENST00000511092 CLCN3-006 protein_coding Homo_sapiens 0 464
ENST00000512813 CLCN3-007 protein_coding Homo_sapiens 0 331
ENST00000513761 CLCN3-001 protein_coding Homo_sapiens 0 3158
ENST00000515420 CLCN3-009 protein_coding Homo_sapiens 0 817
ENST00000609203 CLCN3P1-002 processed_transcript Homo_sapiens 0 211
ENST00000613795 CLCN3-202 protein_coding Homo_sapiens 0 3347

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