C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride channel, voltage-sensitive 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000504131 CLCN3-201 ENSG00000109572 9606 + 4:169662722-169723183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000504131
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000504131 1.148±0.00 1.996±0.00 5.531±0.00 3.232±0.00 1.615±0.00 2.918±0.00 4.932±1.42 1.649±0.00 4.687±0.00 1.083±0.00 2.228±0.51 2.270±0.54 3.160±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005247 IEA voltage-gated chloride channel activity
GO:0006821 IEA chloride transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056508 Clcn3-003 protein_coding Mus_musculus 0 4218
ENSMUST00000093490 Clcn3-001 protein_coding Mus_musculus 0 4218
ENSMUST00000110301 Clcn3-004 protein_coding Mus_musculus 0 4054
ENSMUST00000110302 Clcn3-006 protein_coding Mus_musculus 0 3160
ENSMUST00000004430 Clcn3-002 protein_coding Mus_musculus 0 3158
ENSMUST00000129672 Clcn3-010 retained_intron Mus_musculus 0 2257
ENSMUST00000132234 Clcn3-009 retained_intron Mus_musculus 0 1192
ENSMUST00000145741 Clcn3-005 processed_transcript Mus_musculus 0 1064
ENSMUST00000147824 Clcn3-008 retained_intron Mus_musculus 0 590
ENSMUST00000145493 Clcn3-007 retained_intron Mus_musculus 0 211

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