C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride channel, voltage-sensitive 3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000609203 CLCN3P1-002 ENSG00000232000 9606 - 9:14987302-15146401 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000609203
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000609203 0.006±0.00 0.096±0.00 0.254±0.00 0.047±0.00 0.115±0.05 0.005±0.00 0.033±0.00 0.035±0.00 0.232±0.00 0.030±0.00 0.018±0.00 0.020±0.00 0.252±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000943 CIL_000943_0001 VISTA 9:14449160-15052146
CIL_00014A CIL_00014A_0001 CGP 9:14734666-15307360

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129672 Clcn3-010 retained_intron Mus_musculus 0 211
ENSMUST00000132234 Clcn3-009 retained_intron Mus_musculus 0 211
ENSMUST00000110302 Clcn3-006 protein_coding Mus_musculus 0 211
ENSMUST00000056508 Clcn3-003 protein_coding Mus_musculus 0 211
ENSMUST00000093490 Clcn3-001 protein_coding Mus_musculus 0 211
ENSMUST00000147824 Clcn3-008 retained_intron Mus_musculus 0 209
ENSMUST00000110301 Clcn3-004 protein_coding Mus_musculus 0 209
ENSMUST00000004430 Clcn3-002 protein_coding Mus_musculus 0 209
ENSMUST00000145493 Clcn3-007 retained_intron Mus_musculus 0 206
ENSMUST00000112298 Ssh1-002 protein_coding Mus_musculus 0.00004 55
ENSMUST00000159592 Ssh1-001 protein_coding Mus_musculus 0.00004 55

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