C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chloride channel, voltage-sensitive 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613795 CLCN3-202 ENSG00000109572 9606 + 4:169660062-169723187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverOvaryPlacentaTestisENST00000613795
Transcript ID Bladder Brain Breast Colon Heart Liver Ovary Placenta Testis
ENST00000613795 1.718±0.00 16.574±0.00 3.776±0.00 6.046±0.00 3.802±0.90 4.501±0.00 2.359±1.95 0.905±0.00 3.771±2.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005247 IEA voltage-gated chloride channel activity
GO:0006821 IEA chloride transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030554 IEA adenyl nucleotide binding
GO:0034220 IEA ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056508 Clcn3-003 protein_coding Mus_musculus 0 4641
ENSMUST00000093490 Clcn3-001 protein_coding Mus_musculus 0 4218
ENSMUST00000110301 Clcn3-004 protein_coding Mus_musculus 0 4054
ENSMUST00000110302 Clcn3-006 protein_coding Mus_musculus 0 3347
ENSMUST00000004430 Clcn3-002 protein_coding Mus_musculus 0 3158
ENSMUST00000129672 Clcn3-010 retained_intron Mus_musculus 0 2680
ENSMUST00000132234 Clcn3-009 retained_intron Mus_musculus 0 1423
ENSMUST00000145741 Clcn3-005 processed_transcript Mus_musculus 0 1064
ENSMUST00000147824 Clcn3-008 retained_intron Mus_musculus 0 590
ENSMUST00000145493 Clcn3-007 retained_intron Mus_musculus 0 211

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