C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AT rich interactive domain 4B (RBP1-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110533 Arid4b-003 ENSMUSG00000039219 10090 + 13:14063799-14165682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000110533
Transcript ID Adrenal
ENSMUST00000110533 3.821±0.36

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006349 IGI regulation of gene expression by genetic imprinting
GO:0007283 IGI spermatogenesis
GO:0034773 IGI histone H4-K20 trimethylation
GO:0036124 IGI histone H3-K9 trimethylation
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0097368 IGI establishment of Sertoli cell barrier

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264183 ARID4B-201 protein_coding Homo_sapiens 0 1951
ENST00000349213 ARID4B-001 protein_coding Homo_sapiens 0 1951
ENST00000366603 ARID4B-004 protein_coding Homo_sapiens 0 1949
ENST00000418304 ARID4B-007 protein_coding Homo_sapiens 0 2174
ENST00000421364 ARID4B-010 nonsense_mediated_decay Homo_sapiens 0 1951
ENST00000466653 ARID4B-002 retained_intron Homo_sapiens 0 1325
ENST00000471257 ARID4B-003 retained_intron Homo_sapiens 0 1068
ENST00000491632 ARID4B-005 retained_intron Homo_sapiens 0 1951

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