C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT rich interactive domain 4B (RBP1-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418304 ARID4B-007 ENSG00000054267 9606 - 1:235219927-235328196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartPlacentaENST00000418304
Transcript ID Colon Heart Placenta
ENST00000418304 8.172±0.00 1.418±0.00 15.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KF CIL_0006KF_0001 CGP 1:235109336-235161457
CIL_0000L1 CIL_0000L1_0002 CGP 1:235131634-235344532

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039538 Arid4b-201 protein_coding Mus_musculus 0 2230
ENSMUST00000110534 Arid4b-001 protein_coding Mus_musculus 0 2230
ENSMUST00000110533 Arid4b-003 protein_coding Mus_musculus 0 2174
ENSMUST00000129488 Arid4b-002 protein_coding Mus_musculus 0 1993
ENSMUST00000110536 Arid4b-004 protein_coding Mus_musculus 0 1991
ENSMUST00000155553 Arid4b-007 processed_transcript Mus_musculus 0 248
ENSDART00000128291 arid4a-201 protein_coding Danio_rerio 6.00036e-42 176
ENSDART00000103228 arid4a-002 protein_coding Danio_rerio 6.00036e-42 176
ENSDART00000064412 arid4a-001 protein_coding Danio_rerio 6.00036e-42 176
ENSDART00000151847 arid4a-003 protein_coding Danio_rerio 6.00036e-42 176
ENSMUST00000151182 Arid4b-008 processed_transcript Mus_musculus 1e-34 152

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