C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: congenital dyserythropoietic anemia, type I (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110701 Cdan1-201 ENSMUSG00000027284 10090 - 2:120716154-120731517 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverOvaryPlacentaENSMUST00000110701
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Ovary Placenta
ENSMUST00000110701 2.683±0.45 2.869±0.00 4.179±0.06 3.761±0.63 1.675±0.23 1.521±0.60 2.295±1.50 4.848±1.06 1.427±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PH CIL_0005PH_0002 CGP 2:120609383-120731895
CIL_0005PG CIL_0005PG_0002 CGP 2:120629126-120850128
CIL_0005YE CIL_0005YE_0002 CGP 2:120716154-120850604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005886 IEA plasma membrane
GO:0006325 IEA chromatin organization
GO:0008104 IEA protein localization
GO:0008156 ISS negative regulation of DNA replication
GO:0012505 IEA endomembrane system
GO:0016021 IEA integral component of membrane
GO:0031497 ISS chromatin assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356231 CDAN1-001 protein_coding Homo_sapiens 0 3978
ENST00000562465 CDAN1-002 nonsense_mediated_decay Homo_sapiens 0 1085
ENST00000563260 CDAN1-005 protein_coding Homo_sapiens 0 250

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