C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G patch domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110943 Gpatch2-001 ENSMUSG00000039210 10090 + 1:187215522-187351704 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000110943
Transcript ID Bladder Brain Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000110943 1.420±0.18 1.461±0.00 0.272±0.00 0.417±0.00 0.779±0.09 1.085±0.00 0.684±0.21 1.026±0.00 1.193±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086S CIL_00086S_0002 VISTA 1:186622310-187223505
CIL_0007JY CIL_0007JY_0002 UCNEbase 1:186701249-188943182
CIL_000994 CIL_000994_0002 VISTA 1:186948277-187549469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0010923 ISS negative regulation of phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366934 GPATCH2-002 protein_coding Homo_sapiens 0 1123
ENST00000366935 GPATCH2-001 protein_coding Homo_sapiens 0 1149
ENST00000470014 GPATCH2-005 processed_transcript Homo_sapiens 3e-30 135

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