C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scavenger receptor cysteine rich family, 4 domains
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111153 Srcrb4d-002 ENSMUSG00000029699 10090 - 5:135960211-135974531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000111153
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000111153 0.268±0.00 0.760±0.20 0.211±0.00 0.191±0.12 0.212±0.04 0.024±0.00 0.199±0.00 0.118±0.00 0.893±0.58 0.149±0.05 0.041±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E6 CIL_0006E6_0002 CGP 5:135908409-135974531
CIL_0006E7 CIL_0006E7_0002 CGP 5:135960211-135988624

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006898 IEA receptor-mediated endocytosis
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275560 SSC4D-001 protein_coding Homo_sapiens 0 1812
ENST00000336517 ZP3-002 protein_coding Homo_sapiens 0 313
ENST00000492979 SSC4D-003 processed_transcript Homo_sapiens 0 492

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