C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: diphthamine biosynthesis 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112001 Dph3-003 ENSMUSG00000021905 10090 - 14:32080569-32085609 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000112001
Transcript ID Ovary Testis
ENSMUST00000112001 3.217±0.49 1.232±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HN CIL_0004HN_0002 CGP 14:32028989-32085692
CIL_0004HO CIL_0004HO_0002 CGP 14:32080566-32103202

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217162 TCFL5-201 protein_coding Homo_sapiens 7e-33 147
ENST00000285082 DPH3-003 processed_transcript Homo_sapiens 0 222
ENST00000462982 DPH3-004 processed_transcript Homo_sapiens 0 224
ENST00000486648 DPH3P1-001 processed_pseudogene Homo_sapiens 2e-33 145
ENST00000488423 DPH3-001 protein_coding Homo_sapiens 0 224

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