C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112150 Tpt1-ps5-201 ENSMUSG00000059252 10090 + 9:37696515-37697033 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000112150
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000112150 0.240±0.05 0.074±0.04 0.040±0.00 0.131±0.00 0.091±0.00 0.057±0.03 0.297±0.15 0.414±0.20 0.224±0.17 0.258±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309246 TPT1-004 protein_coding Homo_sapiens 0 627
ENST00000379055 TPT1-003 protein_coding Homo_sapiens 0 593
ENST00000379056 TPT1-002 protein_coding Homo_sapiens 0 499
ENST00000379060 TPT1-011 protein_coding Homo_sapiens 0 614
ENST00000413759 TPT1P9-001 processed_pseudogene Homo_sapiens 0 534
ENST00000458298 TPT1P6-001 processed_pseudogene Homo_sapiens 0 484
ENST00000484604 TPT1-005 retained_intron Homo_sapiens 0 276
ENST00000490277 TPT1-006 retained_intron Homo_sapiens 7e-37 159
ENST00000527226 TPT1-012 protein_coding Homo_sapiens 0 555
ENST00000528619 TPT1-008 protein_coding Homo_sapiens 0 206
ENST00000529421 TPT1-013 processed_transcript Homo_sapiens 0 499
ENST00000530245 TPT1-009 protein_coding Homo_sapiens 0 206
ENST00000530705 TPT1-001 protein_coding Homo_sapiens 0 632
ENST00000533567 TPT1-010 retained_intron Homo_sapiens 3e-36 156
ENST00000616577 TPT1-201 protein_coding Homo_sapiens 0 627

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