C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379056 TPT1-002 ENSG00000133112 9606 - 13:45336873-45341212 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379056
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379056 376.962±0.00 546.622±0.00 46.673±0.00 87.377±33.28 225.156±91.30 330.256±233.83 133.211±78.20 236.428±90.39 135.726±8.32 265.378±142.71 402.867±133.07 652.116±365.42 460.653±51.89 227.712±130.82

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005771 IDA multivesicular body
GO:0006816 IC calcium ion transport
GO:0006874 IC cellular calcium ion homeostasis
GO:0009615 IEP response to virus
GO:0042981 NAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0045298 IDA tubulin complex
GO:0070062 IDA extracellular vesicular exosome
GO:1902230 IMP negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142061 Tpt1-002 protein_coding Mus_musculus 0 852
ENSMUST00000134040 Tpt1-005 processed_transcript Mus_musculus 0 701
ENSMUST00000110894 Tpt1-001 protein_coding Mus_musculus 0 701
ENSMUST00000121046 Tpt1-ps3-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000112150 Tpt1-ps5-201 processed_pseudogene Mus_musculus 0 499
ENSMUST00000150047 Tpt1-003 retained_intron Mus_musculus 2e-25 121
ENSMUST00000128889 Tpt1-004 retained_intron Mus_musculus 7e-25 119
ENSMUST00000154533 Tpt1-006 retained_intron Mus_musculus 0.000000000004 77

Loading