C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 7, type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112701 Cdh7-001 ENSMUSG00000026312 10090 + 1:109982710-110140157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000112701
Transcript ID Brain Ovary Placenta
ENSMUST00000112701 0.617±0.00 0.085±0.01 0.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076K CIL_00076K_0002 CGP 1:107590006-110140157
CIL_0005QJ CIL_0005QJ_0002 CGP 1:109982431-110977584

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323011 CDH7-002 protein_coding Homo_sapiens 0 3184
ENST00000397968 CDH7-001 protein_coding Homo_sapiens 0 3253
ENST00000536984 CDH7-003 protein_coding Homo_sapiens 0 2590

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