C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00076K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166401-ENSG00000081138 CGP 9606 18:63969925-65890341
GeneTranscriptPositionBiotype
ENSG00000081138 (CDH7)
cadherin 7, type 2 		ENST00000323011 (CDH7-002) 65750252-65880939 protein_coding
ENST00000397968 (CDH7-001) 65750921-65890341 protein_coding
ENST00000536984 (CDH7-003) 65750653-65864125 protein_coding
ENST00000581601 (CDH7-004) 65763008-65803810 processed_transcript
ENSG00000166401 (SERPINB8)
serpin peptidase inhibitor, clade B (ovalbumin), member 8 		ENST00000295211 (SERPINB8-003) 63979808-63987396 protein_coding
ENST00000353706 (SERPINB8-201) 63970029-63989371 protein_coding
ENST00000397985 (SERPINB8-001) 63969925-63989374 protein_coding
ENST00000397988 (SERPINB8-002) 63970119-63986653 protein_coding
ENST00000441827 (SERPINB8-006) 63970505-63983647 protein_coding
ENST00000448851 (SERPINB8-005) 63970249-63981786 protein_coding
ENST00000493661 (SERPINB8-004) 63985176-64005667 protein_coding
ENST00000542677 (SERPINB8-202) 63970029-63989371 protein_coding
ENSG00000179676 (LINC00305)
long intergenic non-protein coding RNA 305 		ENST00000323355 (LINC00305-001) 64080009-64149030 lincRNA
ENST00000454647 (LINC00305-002) 64080302-64098610 lincRNA
ENST00000456505 (LINC00305-003) 64139453-64148874 lincRNA
ENSG00000236392 (AC100848.1)
 ENST00000417298 (AC100848.1-001) 64147209-64159294 lincRNA
ENST00000452004 (AC100848.1-002) 64156215-64159299 lincRNA
ENSG00000237314 (RPL12P39)
ribosomal protein L12 pseudogene 39 		ENST00000455456 (RPL12P39-001) 64072158-64072653 processed_pseudogene
ENSG00000263720 (RP11-389J22.1)
 ENST00000581987 (RP11-389J22.1-001) 65865262-65866397 sense_intronic
ENSG00000263863 (AC007948.1)
 ENST00000581632 (AC007948.1-001) 65105873-65125710 lincRNA
ENSG00000264232 (RP11-453M23.1)
 ENST00000582028 (RP11-453M23.1-001) 65424013-65447512 lincRNA
ENSG00000265217 (RP11-775G23.1)
 ENST00000579862 (RP11-775G23.1-001) 65606090-65652053 lincRNA
ENSG00000266952 (RP11-909B2.1)
long intergenic non-protein coding RNA 1538 		ENST00000588074 (RP11-909B2.1-001) 64213082-64260055 lincRNA
ENSG00000267134 (RP11-146N18.1)
 ENST00000589376 (RP11-146N18.1-001) 64104091-64423601 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00076K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026315-ENSMUSG00000026312 CGP 10090 1:107590006-110140157
GeneTranscriptPositionBiotype
ENSMUSG00000026312 (Cdh7)
cadherin 7, type 2 		ENSMUST00000027542 (Cdh7-201) 109993982-110139189 protein_coding
ENSMUST00000112701 (Cdh7-001) 109982710-110140157 protein_coding
ENSMUST00000129923 (Cdh7-003) 109982981-109995323 protein_coding
ENSMUST00000131464 (Cdh7-005) 109983229-110139195 nonsense_mediated_decay
ENSMUST00000134301 (Cdh7-007) 110099295-110138058 protein_coding
ENSMUST00000137092 (Cdh7-002) 109982431-109995955 protein_coding
ENSMUST00000145188 (Cdh7-006) 109983006-109994382 protein_coding
ENSMUST00000146282 (Cdh7-004) 109983281-109998669 protein_coding
ENSMUST00000172005 (Cdh7-202) 109983737-110139001 protein_coding
ENSMUSG00000026315 (Serpinb8)
serine (or cysteine) peptidase inhibitor, clade B, member 8 		ENSMUST00000000514 (Serpinb8-002) 107590006-107608909 protein_coding
ENSMUST00000112706 (Serpinb8-001) 107590006-107610484 protein_coding
ENSMUST00000123086 (Serpinb8-004) 107605880-107607325 protein_coding
ENSMUST00000151283 (Serpinb8-003) 107590046-107606150 retained_intron
ENSMUSG00000086161 (Gm15389)
predicted gene 15389 		ENSMUST00000153774 (Gm15389-001) 107687008-107693514 lincRNA
ENSMUSG00000099484 (RP24-146C18.1)
predicted gene 28282 		ENSMUST00000186072 (RP24-146C18.1-001) 107963122-107963307 processed_pseudogene
ENSMUSG00000100025 (RP24-302H24.1)
predicted gene 8141 		ENSMUST00000190856 (RP24-302H24.1-001) 109833024-109834746 processed_pseudogene
ENSMUSG00000100041 (RP24-306F17.1)
predicted gene 5702 		ENSMUST00000185629 (RP24-306F17.1-001) 108376970-108379438 processed_pseudogene
ENSMUSG00000100457 (RP23-428E11.1)
RIKEN cDNA D830032E09 gene 		ENSMUST00000186875 (RP23-428E11.1-002) 107917285-107950947 lincRNA
ENSMUST00000189497 (RP23-428E11.1-003) 107936709-108028337 lincRNA
ENSMUST00000189845 (RP23-428E11.1-001) 107917259-107950934 lincRNA
ENSMUSG00000101477 (RP23-428E11.2)
predicted gene, 18448 		ENSMUST00000186286 (RP23-428E11.2-001) 107952837-107953435 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076K_0001ENSG00000081138ENST00000323011ENST00000397968ENST00000536984ENST00000581601ENSG00000166401ENST00000295211ENST00000353706ENST00000397985ENST00000397988ENST00000441827ENST00000448851ENST00000493661ENST00000542677ENSG00000179676ENST00000323355ENST00000454647ENST00000456505ENSG00000236392ENST00000417298ENST00000452004ENSG00000237314ENST00000455456ENSG00000263720ENST00000581987ENSG00000263863ENST00000581632ENSG00000264232ENST00000582028ENSG00000265217ENST00000579862ENSG00000266952ENST00000588074ENSG00000267134ENST00000589376CIL_00076K_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076K_0001ENSG00000081138ENST00000323011ENST00000397968ENST00000536984ENSG00000166401ENST00000295211ENST00000353706ENST00000397985ENST00000397988ENST00000441827ENST00000542677ENSG00000179676ENST00000323355ENST00000454647ENST00000456505ENSG00000236392ENST00000417298ENST00000452004ENSG00000237314ENST00000455456ENSG00000263720ENST00000581987ENSG00000263863ENST00000581632ENSG00000264232ENST00000582028ENSG00000265217ENST00000579862ENSG00000266952ENST00000588074ENSG00000267134ENST00000589376CIL_00076K_0002ENSMUSG00000026312ENSMUST00000027542ENSMUST00000112701ENSMUST00000129923ENSMUST00000131464ENSMUST00000137092ENSMUST00000146282ENSMUST00000172005ENSMUSG00000026315ENSMUST00000000514ENSMUST00000112706ENSMUST00000123086ENSMUST00000151283ENSMUSG00000086161ENSMUST00000153774ENSMUSG00000099484ENSMUST00000186072ENSMUSG00000100025ENSMUST00000190856ENSMUSG00000100041ENSMUST00000185629ENSMUSG00000100457ENSMUST00000186875ENSMUST00000189497ENSMUST00000189845ENSMUSG00000101477ENSMUST00000186286
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081138 ENST00000323011 N/A N/A N/A 0.744±0.17 0.014±0.00 N/A N/A N/A N/A 0.013±0.00 N/A 0.025±0.01 0.054±0.00 0.244±0.08
ENST00000397968 0.010±0.00 0.009±0.00 0.004±0.00 0.313±0.01 0.005±0.00 0.008±0.00 0.004±0.00 0.005±0.00 0.004±0.00 0.006±0.00 0.001±0.00 0.004±0.00 0.007±0.00 0.044±0.00
ENST00000536984 0.014±0.00 0.109±0.00 N/A N/A 0.041±0.00 0.011±0.00 0.019±0.00 0.037±0.00 0.012±0.00 0.046±0.00 0.006±0.00 0.011±0.00 N/A 0.057±0.00
ENST00000581601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166401 ENST00000295211 2.348±0.00 3.422±0.00 N/A 2.027±0.00 1.338±0.00 1.358±0.00 N/A 1.893±0.18 4.031±0.00 2.082±0.04 1.799±0.00 0.951±0.16 1.633±0.47 1.626±0.00
ENST00000353706 N/A N/A N/A N/A 0.731±0.00 N/A N/A N/A 1.909±0.00 2.025±0.00 N/A N/A 0.406±0.00 N/A
ENST00000397985 0.585±0.00 N/A N/A 0.141±0.00 1.613±0.00 0.368±0.00 0.193±0.00 0.765±0.00 0.663±0.00 0.824±0.00 N/A 0.370±0.16 0.471±0.11 N/A
ENST00000397988 N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000441827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.676±0.00
ENST00000448851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542677 N/A N/A N/A N/A N/A 0.231±0.00 0.333±0.00 0.469±0.00 0.167±0.00 0.504±0.00 0.400±0.12 0.283±0.00 0.374±0.00 0.350±0.00
ENSG00000179676 ENST00000323355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.01 0.022±0.00 1.145±0.28
ENST00000454647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.02 N/A
ENST00000456505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.652±1.07
ENSG00000236392 ENST00000417298 N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00
ENST00000452004 N/A 0.123±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.260±0.14
ENSG00000237314 ENST00000455456 N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A N/A 0.057±0.02
ENSG00000263720 ENST00000581987 N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263863 ENST00000581632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.429±0.00
ENSG00000264232 ENST00000582028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 0.049±0.00
ENSG00000265217 ENST00000579862 0.069±0.00 0.143±0.00 N/A 0.094±0.00 0.216±0.00 N/A 0.387±0.00 N/A 0.047±0.00 N/A N/A 0.019±0.00 N/A 0.368±0.06
ENSG00000266952 ENST00000588074 N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00
ENSG00000267134 ENST00000589376 N/A 0.013±0.00 N/A N/A N/A N/A 0.016±0.00 0.018±0.00 N/A N/A N/A N/A N/A 0.062±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026312 ENSMUST00000027542 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A
ENSMUST00000112701 N/A N/A N/A 0.617±0.00 N/A N/A N/A N/A N/A N/A N/A 0.085±0.01 0.002±0.00 N/A
ENSMUST00000129923 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A 0.008±0.00 N/A 0.009±0.00
ENSMUST00000131464 N/A N/A N/A 0.539±0.00 N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137092 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A
ENSMUST00000145188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146282 0.017±0.00 N/A N/A 0.627±0.03 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.003±0.00 0.004±0.00 N/A
ENSMUST00000172005 N/A N/A N/A 1.833±0.00 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.007±0.00 N/A N/A
ENSMUSG00000026315 ENSMUST00000000514 1.893±0.10 0.510±0.11 2.706±0.12 0.043±0.03 1.599±0.70 0.513±0.10 0.606±0.17 5.324±1.14 0.970±0.95 2.226±0.61 0.151±0.08 1.587±0.80 0.193±0.13 0.044±0.01
ENSMUST00000112706 0.833±0.16 0.441±0.18 1.268±0.37 0.065±0.00 0.952±0.44 0.215±0.07 0.253±0.08 1.659±0.00 0.188±0.18 1.415±0.43 0.051±0.00 0.513±0.30 0.069±0.05 0.046±0.02
ENSMUST00000123086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.257±0.00 0.155±0.00
ENSMUST00000151283 N/A N/A N/A 0.056±0.00 N/A 0.291±0.04 N/A N/A N/A N/A 0.146±0.03 0.943±0.03 0.117±0.04 N/A
ENSMUSG00000086161 ENSMUST00000153774 N/A N/A N/A 1.180±0.00 N/A 0.143±0.00 0.069±0.00 N/A 0.017±0.00 0.110±0.00 N/A 0.410±0.27 0.179±0.17 3.925±1.41
ENSMUSG00000099484 ENSMUST00000186072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.618±0.00
ENSMUSG00000100025 ENSMUST00000190856 0.059±0.03 N/A 0.010±0.00 0.037±0.03 0.053±0.00 N/A N/A N/A 0.016±0.01 0.027±0.00 0.021±0.00 0.044±0.03 0.222±0.24 0.030±0.01
ENSMUSG00000100041 ENSMUST00000185629 N/A N/A N/A N/A 0.028±0.01 N/A N/A 0.024±0.01 N/A N/A 0.156±0.12 0.077±0.04 0.004±0.00 0.365±0.07
ENSMUSG00000100457 ENSMUST00000186875 N/A 0.150±0.00 N/A N/A N/A N/A 0.790±0.24 N/A 0.049±0.03 N/A 0.160±0.06 N/A N/A N/A
ENSMUST00000189497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.01 N/A N/A 0.032±0.00
ENSMUST00000189845 N/A N/A N/A 0.012±0.00 0.027±0.00 N/A N/A 0.025±0.00 0.003±0.00 N/A 0.133±0.01 N/A 0.003±0.00 N/A
ENSMUSG00000101477 ENSMUST00000186286 N/A N/A N/A 0.032±0.00 N/A N/A 0.181±0.04 N/A 0.012±0.00 N/A 0.122±0.05 N/A N/A 0.258±0.18

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