C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113721 Rnf25-003 ENSMUSG00000026171 10090 - 1:74593753-74601377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113721 9.130±1.77 5.796±2.22 14.625±0.00 16.131±14.05 9.309±2.53 7.918±1.17 5.268±1.04 7.249±0.54 5.779±0.79 4.187±0.96 3.325±0.42 11.421±2.60 5.125±1.50 11.152±9.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000654 CIL_000654_0002 CGP 1:74588289-74601397
CIL_0006PW CIL_0006PW_0002 CGP 1:74593748-74636894

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295704 RNF25-001 protein_coding Homo_sapiens 0 1423
ENST00000423170 RNF25-004 nonsense_mediated_decay Homo_sapiens 0 542
ENST00000463188 RNF25-003 retained_intron Homo_sapiens 0 730
ENST00000473034 RNF25-002 retained_intron Homo_sapiens 0 1173
ENST00000497832 RNF25-005 retained_intron Homo_sapiens 0 302

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