C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423170 RNF25-004 ENSG00000163481 9606 - 2:218665154-218671967 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000423170
Transcript ID Lung Muscle
ENST00000423170 3.385±0.00 3.332±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000654 CIL_000654_0001 CGP 2:218658764-218672411
CIL_0006PW CIL_0006PW_0001 CGP 2:218663864-218702716

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027357 Rnf25-001 protein_coding Mus_musculus 0 562
ENSMUST00000135140 Rnf25-002 nonsense_mediated_decay Mus_musculus 0 562
ENSMUST00000127938 Rnf25-009 protein_coding Mus_musculus 0 560
ENSMUST00000113721 Rnf25-003 protein_coding Mus_musculus 0 542
ENSMUST00000128491 Rnf25-006 retained_intron Mus_musculus 0 206
ENSMUST00000132081 Rnf25-008 protein_coding Mus_musculus 2e-37 159
ENSMUST00000136078 Rnf25-005 protein_coding Mus_musculus 2e-37 159

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