C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163481-ENSG00000163482 CGP 9606 2:218663864-218702716
GeneTranscriptPositionBiotype
ENSG00000163481 (RNF25)
ring finger protein 25 		ENST00000295704 (RNF25-001) 218663864-218672411 protein_coding
ENST00000423170 (RNF25-004) 218665154-218671967 nonsense_mediated_decay
ENST00000463188 (RNF25-003) 218664827-218671984 retained_intron
ENST00000473034 (RNF25-002) 218663892-218671977 retained_intron
ENST00000474339 (RNF25-006) 218664167-218664901 retained_intron
ENST00000497832 (RNF25-005) 218665932-218668168 retained_intron
ENSG00000163482 (STK36)
serine/threonine kinase 36 		ENST00000295709 (STK36-001) 218672026-218702715 protein_coding
ENST00000392105 (STK36-002) 218672069-218702709 protein_coding
ENST00000414413 (STK36-010) 218680050-218689863 nonsense_mediated_decay
ENST00000419433 (STK36-005) 218696529-218702716 nonsense_mediated_decay
ENST00000422778 (STK36-012) 218680693-218690527 nonsense_mediated_decay
ENST00000424080 (STK36-009) 218672343-218679617 protein_coding
ENST00000440309 (STK36-003) 218672296-218702623 protein_coding
ENST00000455724 (STK36-006) 218672071-218675428 protein_coding
ENST00000462031 (STK36-017) 218697028-218698701 retained_intron
ENST00000468026 (STK36-007) 218672321-218673253 retained_intron
ENST00000470568 (STK36-011) 218684734-218688781 retained_intron
ENST00000473557 (STK36-008) 218672339-218675391 retained_intron
ENST00000473681 (STK36-016) 218694524-218696960 retained_intron
ENST00000480709 (STK36-013) 218688837-218692550 retained_intron
ENST00000486644 (STK36-015) 218693296-218697190 retained_intron
ENST00000492486 (STK36-014) 218692427-218694278 retained_intron
CIL_0006PW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026171-ENSMUSG00000033276 CGP 10090 1:74593748-74636894
GeneTranscriptPositionBiotype
ENSMUSG00000026171 (Rnf25)
ring finger protein 25 		ENSMUST00000027357 (Rnf25-001) 74593748-74601397 protein_coding
ENSMUST00000113721 (Rnf25-003) 74593753-74601377 protein_coding
ENSMUST00000127938 (Rnf25-009) 74595209-74600564 protein_coding
ENSMUST00000128491 (Rnf25-006) 74598550-74601394 retained_intron
ENSMUST00000132081 (Rnf25-008) 74598733-74601365 protein_coding
ENSMUST00000135140 (Rnf25-002) 74593748-74601372 nonsense_mediated_decay
ENSMUST00000136078 (Rnf25-005) 74598363-74601345 protein_coding
ENSMUST00000149649 (Rnf25-007) 74594222-74594801 retained_intron
ENSMUST00000151003 (Rnf25-010) 74598185-74598597 retained_intron
ENSMUST00000154874 (Rnf25-004) 74595885-74600599 protein_coding
ENSMUSG00000033276 (Stk36)
serine/threonine kinase 36 		ENSMUST00000087183 (Stk36-001) 74601445-74636894 protein_coding
ENSMUST00000087186 (Stk36-002) 74601639-74636043 protein_coding
ENSMUST00000113694 (Stk36-007) 74601514-74605525 protein_coding
ENSMUST00000123154 (Stk36-005) 74626465-74636894 retained_intron
ENSMUST00000145673 (Stk36-006) 74601480-74636891 retained_intron
ENSMUST00000148456 (Stk36-003) 74601503-74634100 protein_coding
ENSMUST00000155473 (Stk36-004) 74622830-74636086 processed_transcript
ENSMUST00000157007 (Stk36-008) 74622353-74625911 retained_intron
ENSMUST00000189830 (Stk36-009) 74603210-74611256 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PW_0001ENSG00000163481ENST00000295704ENST00000423170ENST00000463188ENST00000473034ENST00000474339ENST00000497832ENSG00000163482ENST00000295709ENST00000392105ENST00000414413ENST00000419433ENST00000422778ENST00000424080ENST00000440309ENST00000455724ENST00000462031ENST00000468026ENST00000470568ENST00000473557ENST00000473681ENST00000480709ENST00000486644ENST00000492486CIL_0006PW_0002ENSMUSG00000026171ENSMUST00000027357ENSMUST00000113721ENSMUST00000127938ENSMUST00000128491ENSMUST00000132081ENSMUST00000135140ENSMUST00000136078ENSMUST00000149649ENSMUST00000151003ENSMUST00000154874ENSMUSG00000033276ENSMUST00000087183ENSMUST00000087186ENSMUST00000113694ENSMUST00000123154ENSMUST00000145673ENSMUST00000148456ENSMUST00000155473ENSMUST00000157007ENSMUST00000189830
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PW_0001ENSG00000163481ENST00000295704ENST00000423170ENST00000463188ENST00000473034ENST00000474339ENSG00000163482ENST00000295709ENST00000392105ENST00000419433ENST00000424080ENST00000440309ENST00000462031ENST00000480709CIL_0006PW_0002ENSMUSG00000026171ENSMUST00000027357ENSMUST00000113721ENSMUST00000127938ENSMUST00000135140ENSMUSG00000033276ENSMUST00000087183ENSMUST00000087186ENSMUST00000113694ENSMUST00000123154ENSMUST00000145673ENSMUST00000148456ENSMUST00000155473ENSMUST00000157007ENSMUST00000189830
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163481 ENST00000295704 1.948±0.00 6.409±0.00 N/A 4.114±0.48 2.057±0.86 1.791±0.54 1.192±0.92 4.371±2.65 1.828±0.00 1.528±0.74 2.366±0.98 8.649±7.93 7.530±3.10 11.336±0.00
ENST00000423170 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.385±0.00 3.332±0.00 N/A N/A N/A
ENST00000463188 2.891±0.00 N/A N/A 4.956±0.00 N/A N/A 0.818±0.00 N/A 3.250±0.00 N/A N/A N/A 7.417±0.00 N/A
ENST00000473034 N/A N/A N/A N/A N/A 1.052±0.00 N/A N/A 1.205±0.00 N/A N/A N/A N/A N/A
ENST00000474339 9.967±0.00 21.855±0.00 N/A 11.934±0.49 13.196±0.00 8.142±0.00 3.150±1.64 3.589±0.00 N/A 7.011±0.00 5.190±0.00 N/A 10.077±1.41 N/A
ENST00000497832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163482 ENST00000295709 0.491±0.00 N/A N/A N/A N/A N/A N/A 1.702±0.00 N/A N/A N/A 2.157±0.37 1.140±0.00 N/A
ENST00000392105 N/A 1.492±0.00 N/A N/A N/A 0.642±0.00 N/A N/A N/A 0.473±0.00 N/A 3.387±0.52 N/A 16.459±9.42
ENST00000414413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419433 1.016±0.00 2.636±0.00 0.985±0.00 N/A 1.556±0.00 0.970±0.00 N/A 5.720±0.00 1.009±0.00 N/A 0.689±0.00 8.161±0.94 N/A 10.095±0.00
ENST00000422778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424080 N/A N/A N/A N/A N/A N/A N/A N/A 3.934±0.00 N/A N/A 1.347±0.00 N/A N/A
ENST00000440309 N/A N/A 0.518±0.00 N/A 0.958±0.00 0.603±0.00 N/A 2.416±0.00 0.562±0.00 0.919±0.00 N/A 1.656±1.35 1.226±0.00 12.894±6.07
ENST00000455724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.278±0.00 N/A N/A
ENST00000468026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480709 N/A N/A N/A N/A 3.984±0.00 N/A N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A
ENST00000486644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026171 ENSMUST00000027357 13.696±4.93 7.045±1.87 21.770±4.06 23.469±19.94 11.167±1.17 10.855±0.96 4.048±1.94 8.679±2.59 9.538±4.48 9.491±0.62 4.949±1.41 9.156±2.92 15.174±6.55 55.704±30.11
ENSMUST00000113721 9.130±1.77 5.796±2.22 14.625±0.00 16.131±14.05 9.309±2.53 7.918±1.17 5.268±1.04 7.249±0.54 5.779±0.79 4.187±0.96 3.325±0.42 11.421±2.60 5.125±1.50 11.152±9.38
ENSMUST00000127938 N/A 5.007±0.00 N/A N/A 6.726±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135140 N/A N/A N/A 8.684±0.00 N/A N/A N/A N/A N/A N/A 1.005±0.05 N/A 3.616±0.89 4.690±0.00
ENSMUST00000136078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033276 ENSMUST00000087183 0.329±0.00 0.905±0.23 0.131±0.00 2.362±0.00 0.279±0.12 0.278±0.00 0.126±0.00 0.767±0.31 0.088±0.02 1.375±0.00 0.070±0.04 1.410±0.50 0.198±0.07 7.971±2.91
ENSMUST00000087186 N/A N/A N/A N/A 0.329±0.00 N/A N/A 0.219±0.00 N/A N/A 0.007±0.00 N/A N/A 3.429±0.00
ENSMUST00000113694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.06 N/A N/A 25.818±0.00
ENSMUST00000123154 0.250±0.00 0.768±0.18 N/A 1.274±0.98 0.266±0.00 0.281±0.06 0.074±0.00 N/A 0.067±0.04 1.940±0.11 0.088±0.02 1.409±0.35 0.324±0.07 N/A
ENSMUST00000145673 0.189±0.00 0.474±0.12 N/A 2.680±0.38 0.242±0.07 0.177±0.09 0.072±0.00 0.331±0.06 0.068±0.03 1.029±0.00 0.029±0.00 1.365±0.67 0.121±0.03 N/A
ENSMUST00000148456 0.569±0.00 N/A N/A N/A 0.215±0.01 0.295±0.00 0.131±0.07 N/A 0.068±0.03 1.260±0.00 0.039±0.00 2.719±0.00 N/A 30.255±4.10
ENSMUST00000155473 0.419±0.13 0.942±0.12 N/A N/A 0.410±0.18 0.179±0.04 0.125±0.08 0.466±0.15 0.170±0.07 2.530±0.34 0.071±0.00 3.789±1.55 0.136±0.00 15.758±0.00
ENSMUST00000157007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A N/A N/A
ENSMUST00000189830 N/A N/A N/A N/A N/A 0.970±0.39 0.328±0.00 N/A 0.441±0.19 N/A N/A N/A 0.608±0.00 N/A

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