C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463188 RNF25-003 ENSG00000163481 9606 - 2:218664827-218671984 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverPlacentaENST00000463188
Transcript ID Adipose Brain Heart Liver Placenta
ENST00000463188 2.891±0.00 4.956±0.00 0.818±0.00 3.250±0.00 7.417±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000654 CIL_000654_0001 CGP 2:218658764-218672411
CIL_0006PW CIL_0006PW_0001 CGP 2:218663864-218702716

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027357 Rnf25-001 protein_coding Mus_musculus 0 750
ENSMUST00000113721 Rnf25-003 protein_coding Mus_musculus 0 730
ENSMUST00000135140 Rnf25-002 nonsense_mediated_decay Mus_musculus 0 592
ENSMUST00000127938 Rnf25-009 protein_coding Mus_musculus 0 527
ENSMUST00000136078 Rnf25-005 protein_coding Mus_musculus 0 348
ENSMUST00000128491 Rnf25-006 retained_intron Mus_musculus 0 259
ENSMUST00000132081 Rnf25-008 protein_coding Mus_musculus 3e-37 159

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