C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Hippel-Lindau binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114070 Vbp1-002 ENSMUSG00000031197 10090 + X:75514299-75524046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLiverOvaryPlacentaTestisENSMUST00000114070
Transcript ID Adipose Adrenal Liver Ovary Placenta Testis
ENSMUST00000114070 1.021±0.00 0.919±0.41 0.726±0.00 1.874±1.54 8.316±3.10 1.741±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LJ CIL_0003LJ_0002 CGP X:75416628-75534942
CIL_0003LK CIL_0003LK_0002 CGP X:75514299-75578231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 TAS nucleus
GO:0005737 TAS cytoplasm
GO:0006457 IEA protein folding
GO:0016272 IEA prefoldin complex
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286428 VBP1-001 protein_coding Homo_sapiens 0 494
ENST00000460509 VBP1-003 retained_intron Homo_sapiens 0 243
ENST00000535916 VBP1-002 protein_coding Homo_sapiens 0 433

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