C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114977 Tcf4-008 ENSMUSG00000053477 10090 + 18:69593426-69684526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000114977
Transcript ID Testis
ENSMUST00000114977 1.427±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L3 CIL_0007L3_0002 UCNEbase 18:68737371-69577988
CIL_0008QS CIL_0008QS_0002 VISTA 18:68795835-69396788
CIL_000821 CIL_000821_0002 VISTA 18:68824560-69425811
CIL_0008DW CIL_0008DW_0002 VISTA 18:69199161-69800797
CIL_00091Y CIL_00091Y_0002 VISTA 18:69262176-69863579
CIL_0008CT CIL_0008CT_0002 VISTA 18:69306431-69910049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IDA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354452 TCF4-201 protein_coding Homo_sapiens 0 3666
ENST00000356073 TCF4-002 protein_coding Homo_sapiens 0 3722
ENST00000398339 TCF4-004 protein_coding Homo_sapiens 0 2073
ENST00000457482 TCF4-015 protein_coding Homo_sapiens 0 2647
ENST00000537578 TCF4-003 protein_coding Homo_sapiens 0 2270
ENST00000537856 TCF4-013 protein_coding Homo_sapiens 0 2268
ENST00000540999 TCF4-007 protein_coding Homo_sapiens 0 2418
ENST00000543082 TCF4-009 protein_coding Homo_sapiens 0 2420
ENST00000544241 TCF4-011 protein_coding Homo_sapiens 0 2202
ENST00000561831 TCF4-016 protein_coding Homo_sapiens 0 2217
ENST00000561992 TCF4-010 protein_coding Homo_sapiens 0 2241
ENST00000562607 TCF4-035 protein_coding Homo_sapiens 0 307
ENST00000562638 TCF4-043 protein_coding Homo_sapiens 0 281
ENST00000562680 TCF4-018 retained_intron Homo_sapiens 0 1472
ENST00000563686 TCF4-017 retained_intron Homo_sapiens 0 556
ENST00000563760 TCF4-037 processed_transcript Homo_sapiens 0 872
ENST00000564228 TCF4-042 protein_coding Homo_sapiens 0 2154
ENST00000564403 TCF4-019 protein_coding Homo_sapiens 0 2074
ENST00000564999 TCF4-006 protein_coding Homo_sapiens 0 2279
ENST00000565018 TCF4-001 protein_coding Homo_sapiens 0 2148
ENST00000565908 TCF4-024 protein_coding Homo_sapiens 0 237
ENST00000566279 TCF4-045 protein_coding Homo_sapiens 0 2100
ENST00000566286 TCF4-041 protein_coding Homo_sapiens 0 2134
ENST00000566514 TCF4-027 protein_coding Homo_sapiens 0 481
ENST00000566777 TCF4-032 protein_coding Homo_sapiens 0 259
ENST00000567880 TCF4-046 protein_coding Homo_sapiens 0 2156
ENST00000568169 TCF4-021 protein_coding Homo_sapiens 0 418
ENST00000568186 TCF4-033 protein_coding Homo_sapiens 0 285
ENST00000568673 TCF4-008 protein_coding Homo_sapiens 0 2392
ENST00000568740 TCF4-005 protein_coding Homo_sapiens 0 2274
ENST00000569012 TCF4-034 protein_coding Homo_sapiens 0 497
ENST00000570146 TCF4-038 protein_coding Homo_sapiens 0 455
ENST00000570177 TCF4-012 protein_coding Homo_sapiens 0 2060
ENST00000570287 TCF4-044 protein_coding Homo_sapiens 0 2436
ENST00000616053 TCF4-202 protein_coding Homo_sapiens 0 3723

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