C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115118 Cul4b-001 ENSMUSG00000031095 10090 - X:38533274-38576196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartPlacentaTestisENSMUST00000115118
Transcript ID Colon Heart Placenta Testis
ENSMUST00000115118 0.989±0.23 0.527±0.18 14.649±6.20 5.153±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016X CIL_00016X_0003 CGP X:38401357-38576196
CIL_0000GD CIL_0000GD_0003 CGP X:38533274-38613426

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003684 IEA damaged DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0007049 IEA cell cycle
GO:0031465 ISS Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0035518 IEA histone H2A monoubiquitination
GO:0045732 IMP positive regulation of protein catabolic process
GO:0070062 IEA extracellular vesicular exosome
GO:0070914 IEA UV-damage excision repair
GO:1900087 IMP positive regulation of G1/S transition of mitotic cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336592 CUL4B-004 protein_coding Homo_sapiens 0 4224
ENST00000371322 CUL4B-003 protein_coding Homo_sapiens 0 4126
ENST00000371323 CUL4B-007 protein_coding Homo_sapiens 0 952
ENST00000404115 CUL4B-001 protein_coding Homo_sapiens 0 3840
ENST00000467641 CUL4B-005 processed_transcript Homo_sapiens 0 896
ENST00000497616 CUL4B-006 processed_transcript Homo_sapiens 0 802

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