C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000336592 CUL4B-004 ENSG00000158290 9606 - X:120526396-120561440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryENST00000336592
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary
ENST00000336592 4.337±0.00 1.711±0.00 4.075±0.00 5.629±0.00 0.664±0.00 5.181±0.00 3.488±0.00 4.793±0.00 1.206±0.00 4.316±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016X CIL_00016X_0002 CGP X:120427827-120575794
CIL_0000GD CIL_0000GD_0002 CGP X:120524609-120621074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115118 Cul4b-001 protein_coding Mus_musculus 0 4224
ENSMUST00000016681 Cul4b-004 protein_coding Mus_musculus 0 4126
ENSMUST00000050083 Cul4b-003 protein_coding Mus_musculus 0 3879
ENSMUST00000147129 Cul4b-002 nonsense_mediated_decay Mus_musculus 0 2610

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