C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 11864
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116179 Gm11864-001 ENSMUSG00000080065 10090 - 4:16390445-16391664 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderTestisENSMUST00000116179
Transcript ID Bladder Testis
ENSMUST00000116179 0.012±0.00 0.371±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348513 SMARCE1-001 protein_coding Homo_sapiens 0 1242
ENST00000412207 SMARCE1P5-001 processed_pseudogene Homo_sapiens 0 1064
ENST00000417747 SMARCE1P1-001 processed_pseudogene Homo_sapiens 0 542
ENST00000469334 SMARCE1-003 retained_intron Homo_sapiens 0 760
ENST00000474246 SMARCE1-006 protein_coding Homo_sapiens 0 202
ENST00000481231 SMARCE1-007 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000553649 SMARCE1P3-001 processed_pseudogene Homo_sapiens 0 1037
ENST00000580654 SMARCE1-016 protein_coding Homo_sapiens 0 579
ENST00000582955 SMARCE1-019 protein_coding Homo_sapiens 0 488

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