C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553649 SMARCE1P3-001 ENSG00000259102 9606 + 14:21162513-21163743 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000553649
Transcript ID Lung
ENST00000553649 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027N CIL_00027N_0001 CGP 14:21154865-21269494

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103133 Smarce1-001 protein_coding Mus_musculus 0 1421
ENSMUST00000180067 Gm1815-201 processed_pseudogene Mus_musculus 0 1129
ENSMUST00000116179 Gm11864-001 processed_pseudogene Mus_musculus 0 1037
ENSMUST00000178171 Gm8494-201 processed_pseudogene Mus_musculus 0 948
ENSMUST00000155062 Smarce1-005 processed_transcript Mus_musculus 0 505
ENSDART00000121981 smarce1-001 protein_coding Danio_rerio 0 420
ENSDART00000011319 smarce1-201 protein_coding Danio_rerio 0 370
ENSMUST00000121549 Gm12539-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000135040 Smarce1-003 processed_transcript Mus_musculus 0 281

Loading