C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000481231  |
SMARCE1-007 |
ENSG00000073584 |
9606 | - |
17:40635979-40647831  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005QY | CIL_0005QY_0001 | CGP | 17:40553769-40648508 |
| CIL_0004QH | CIL_0004QH_0001 | CGP | 17:40624962-40665141 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000155062
|
Smarce1-005 | processed_transcript | Mus_musculus | 0 | 538 |
|
ENSMUST00000103133
|
Smarce1-001 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000180067
|
Gm1815-201 | processed_pseudogene | Mus_musculus | 0 | 518 |
|
ENSMUST00000135040
|
Smarce1-003 | processed_transcript | Mus_musculus | 0 | 433 |
|
ENSMUST00000178171
|
Gm8494-201 | processed_pseudogene | Mus_musculus | 0 | 274 |
|
ENSMUST00000128215
|
Smarce1-002 | processed_transcript | Mus_musculus | 0 | 239 |
|
ENSMUST00000116179
|
Gm11864-001 | processed_pseudogene | Mus_musculus | 0 | 202 |
|
ENSMUST00000128707
|
Smarce1-004 | processed_transcript | Mus_musculus | 0 | 193 |
|
ENSDART00000121981
|
smarce1-001 | protein_coding | Danio_rerio | 3e-31 | 139 |
|
ENSDART00000011319
|
smarce1-201 | protein_coding | Danio_rerio | 1e-30 | 137 |
