C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L30, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117104 Rpl30-ps5-001 ENSMUSG00000082641 10090 - 2:174440929-174441289 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyPlacentaENSMUST00000117104
Transcript ID Breast Kidney Placenta
ENSMUST00000117104 0.365±0.00 0.174±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001B3 CIL_0001B3_0002 CGP 2:174427493-174457882

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 377
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 187
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 207
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 333
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 287
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 1.4013e-45 187
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 193
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 193
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 1e-39 167
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 377
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 370

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