C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000521112 RPL30-005 ENSG00000156482 9606 - 8:98044868-98045548 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716
CIL_0001KP CIL_0001KP_0001 CGP 8:98024851-98093610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 239
ENSMUST00000140527 Rpl30-004 processed_transcript Mus_musculus 0 226
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 0 226
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 222
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 222
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 209
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 202
ENSMUST00000119630 Rpl30-ps11-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 200
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000117104 Rpl30-ps5-001 processed_pseudogene Mus_musculus 1e-39 167

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