C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396070 RPL30-009 ENSG00000156482 9606 - 8:98041721-98045544 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLungMuscleOvaryPlacentaTestisENST00000396070
Transcript ID Bladder Breast Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000396070 17.139±0.00 55.999±0.00 70.025±0.00 22.718±0.00 143.225±108.15 56.284±0.00 336.998±0.00 225.717±0.00 107.870±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716
CIL_0001KP CIL_0001KP_0001 CGP 8:98024851-98093610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140527 Rpl30-004 processed_transcript Mus_musculus 0 348
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 348
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 0 298
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 298
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 237
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000119630 Rpl30-ps11-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 224
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 220
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 217
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000117104 Rpl30-ps5-001 processed_pseudogene Mus_musculus 0 187
ENSMUST00000136653 Rpl30-006 retained_intron Mus_musculus 6e-37 158
ENSMUST00000122391 Gm14530-001 processed_pseudogene Mus_musculus 9e-35 150
ENSDART00000052082 rpl30-001 protein_coding Danio_rerio 9e-30 134

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