C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30 pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482744 RPL30P14-001 ENSG00000243256 9606 - 18:61404858-61405205 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000482744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000482744 0.178±0.00 0.037±0.00 1.098±0.00 0.181±0.00 0.035±0.00 0.101±0.00 0.217±0.00 0.036±0.00 0.067±0.00 0.956±0.61 0.490±0.00 0.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FG CIL_0007FG_0001 CGP 18:61333582-61894247

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 449
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 449
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 449
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 433
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 425
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 422
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000119630 Rpl30-ps11-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000117104 Rpl30-ps5-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000122391 Gm14530-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000160070 Rpl30-ps2-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000136653 Rpl30-006 retained_intron Mus_musculus 0 226
ENSMUST00000140527 Rpl30-004 processed_transcript Mus_musculus 0 202
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 0 202
ENSMUST00000117313 Gm13714-001 processed_pseudogene Mus_musculus 6e-36 154

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