C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11873
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117877 Gm11873-001 ENSMUSG00000081964 10090 + 4:20391096-20392399 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverOvaryPlacentaTestisENSMUST00000117877
Transcript ID Adipose Bladder Brain Colon Liver Ovary Placenta Testis
ENSMUST00000117877 0.076±0.01 0.011±0.00 0.247±0.20 0.067±0.03 0.008±0.00 0.130±0.06 0.011±0.00 0.023±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000026292 tuba7l-201 protein_coding Danio_rerio 0 481
ENST00000248437 TUBA4A-001 protein_coding Homo_sapiens 0 1216
ENST00000316027 TUBA8-002 protein_coding Homo_sapiens 0 584
ENST00000330423 TUBA8-001 protein_coding Homo_sapiens 0 584
ENST00000392088 TUBA4A-002 protein_coding Homo_sapiens 0 1216
ENST00000398989 TUBA4A-011 protein_coding Homo_sapiens 0 446
ENST00000416740 TUBA8-003 protein_coding Homo_sapiens 0 584
ENST00000427737 TUBA4A-010 protein_coding Homo_sapiens 0 597
ENST00000456818 TUBA4A-004 protein_coding Homo_sapiens 0 549
ENST00000473885 TUBA4B-003 processed_transcript Homo_sapiens 0 379
ENST00000474897 PEX26-004 nonsense_mediated_decay Homo_sapiens 0 584
ENST00000485041 TUBA4B-002 processed_transcript Homo_sapiens 0 379
ENST00000486997 TUBA4B-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 839
ENST00000490341 TUBA4B-001 processed_transcript Homo_sapiens 0 730
ENST00000498660 TUBA4A-006 processed_transcript Homo_sapiens 0 676
ENST00000608634 TUBA8-005 protein_coding Homo_sapiens 0 268

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