Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	tubulin, alpha 4a
ENST00000456818	TUBA4A-004	ENSG00000127824	9606	-	2:219251173-219253145	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000916	CIL_000916_0001	VISTA	2:219106772-219707284
CIL_0006EH	CIL_0006EH_0001	CGP	2:219236606-219250337
CIL_0006NV	CIL_0006NV_0001	CGP	2:219245455-219278170

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005200	IEA	structural constituent of cytoskeleton
GO:0005525	IEA	GTP binding
GO:0005874	IEA	microtubule
GO:0007017	IEA	microtubule-based process

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000186213	Tuba4a-001	protein_coding	Mus_musculus	0	769
ENSMUST00000079464	Tuba4a-002	protein_coding	Mus_musculus	0	767
ENSMUST00000120657	Gm12201-001	processed_pseudogene	Mus_musculus	0	595
ENSMUST00000117877	Gm11873-001	processed_pseudogene	Mus_musculus	0	549
ENSMUST00000187103	Tuba4a-005	retained_intron	Mus_musculus	0	545
ENSMUST00000186971	Tuba4a-008	protein_coding	Mus_musculus	0	527
ENSMUST00000186758	Tuba4a-004	protein_coding	Mus_musculus	0	499
ENSMUST00000087445	Tuba3b-001	protein_coding	Mus_musculus	0	486
ENSMUST00000190717	Tuba4a-006	protein_coding	Mus_musculus	0	453
ENSMUST00000088246	Tuba3a-201	protein_coding	Mus_musculus	0	448
ENSMUST00000189131	Tuba4a-007	protein_coding	Mus_musculus	0	420
ENSMUST00000188593	Tuba4a-003	protein_coding	Mus_musculus	0	315
ENSMUST00000117552	Gm21998-001	processed_pseudogene	Mus_musculus	0	239
ENSMUST00000121141	Gm3928-001	processed_pseudogene	Mus_musculus	0	239

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