C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117878 Uspl1-007 ENSMUSG00000041264 10090 + 5:149184716-149215433 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117878
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117878 1.766±0.00 2.871±0.22 2.587±0.00 2.962±0.00 1.356±0.03 1.204±0.37 1.795±0.24 1.628±0.75 1.304±0.13 3.159±0.58 2.905±0.98 3.745±1.34 2.704±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004CF CIL_0004CF_0002 CGP 5:149046702-149215434
CIL_0004CN CIL_0004CN_0003 CGP 5:149184350-149288045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006508 IEA proteolysis
GO:0008283 ISS cell proliferation
GO:0015030 ISS Cajal body
GO:0016926 ISS protein desumoylation
GO:0030576 ISS Cajal body organization
GO:0032183 ISS SUMO binding
GO:0070140 ISS SUMO-specific isopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255304 USPL1-001 protein_coding Homo_sapiens 0 702
ENST00000614860 USPL1-003 protein_coding Homo_sapiens 0 632

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