C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12966
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118024 Gm12966-001 ENSMUSG00000070729 10090 + 4:129899093-129899902 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118024
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118024 0.213±0.05 0.244±0.09 0.078±0.03 0.490±0.37 0.337±0.25 0.226±0.09 0.383±0.09 0.292±0.18 0.473±0.64 0.335±0.20 0.089±0.03 0.484±0.31 0.102±0.08 0.592±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394366 SRSF5-005 protein_coding Homo_sapiens 0 1133
ENST00000553369 SRSF5-018 protein_coding Homo_sapiens 0 505
ENST00000553521 SRSF5-003 protein_coding Homo_sapiens 0 1133
ENST00000553548 SRSF5-016 protein_coding Homo_sapiens 0 381
ENST00000553635 SRSF5-004 protein_coding Homo_sapiens 0 1081
ENST00000554021 SRSF5-010 protein_coding Homo_sapiens 0 505
ENST00000554465 SRSF5-001 retained_intron Homo_sapiens 0 632
ENST00000554929 SRSF5-008 retained_intron Homo_sapiens 0 510
ENST00000555349 SRSF5-011 protein_coding Homo_sapiens 0 507
ENST00000555547 SRSF5-007 nonsense_mediated_decay Homo_sapiens 0 632
ENST00000556184 SRSF5-006 retained_intron Homo_sapiens 0 632
ENST00000556330 SRSF5-014 retained_intron Homo_sapiens 0 372
ENST00000556436 SRSF5-017 retained_intron Homo_sapiens 5e-34 148
ENST00000556587 SRSF5-019 processed_transcript Homo_sapiens 0 769
ENST00000556647 SRSF5-013 processed_transcript Homo_sapiens 0 632
ENST00000557154 SRSF5-002 protein_coding Homo_sapiens 0 1133
ENST00000557460 SRSF5-015 retained_intron Homo_sapiens 0 422

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