C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | serine/arginine-rich splicing factor 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554021  |
SRSF5-010 |
ENSG00000100650 |
9606 | + |
14:69767940-69769644  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002M1 | CIL_0002M1_0001 | CGP | 14:69611596-69772005 |
| CIL_0000U3 | CIL_0000U3_0001 | CGP | 14:69726900-69797289 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0005737 | IDA | cytoplasm |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000125814
|
Srsf5-006 | processed_transcript | Mus_musculus | 0 | 780 |
|
ENSMUST00000094693
|
Srsf5-201 | protein_coding | Mus_musculus | 0 | 538 |
|
ENSMUST00000110356
|
Srsf5-004 | protein_coding | Mus_musculus | 0 | 538 |
|
ENSMUST00000110351
|
Srsf5-003 | protein_coding | Mus_musculus | 0 | 538 |
|
ENSMUST00000110354
|
Srsf5-009 | protein_coding | Mus_musculus | 0 | 538 |
|
ENSMUST00000153056
|
Srsf5-005 | retained_intron | Mus_musculus | 0 | 536 |
|
ENSMUST00000110352
|
Srsf5-001 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000118024
|
Gm12966-001 | processed_pseudogene | Mus_musculus | 0 | 505 |
|
ENSMUST00000133783
|
Srsf5-012 | retained_intron | Mus_musculus | 0 | 414 |
|
ENSMUST00000151036
|
Srsf5-007 | retained_intron | Mus_musculus | 0 | 363 |
