C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556647 SRSF5-013 ENSG00000100650 9606 + 14:69770448-69772005 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556647
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556647 35.292±0.00 118.958±0.00 64.606±41.03 67.017±0.00 9.043±0.00 22.687±0.00 44.403±13.58 36.509±0.00 47.131±0.00 9.426±2.85 104.816±0.00 26.613±2.06 30.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M1 CIL_0002M1_0001 CGP 14:69611596-69772005
CIL_0000U3 CIL_0000U3_0001 CGP 14:69726900-69797289

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133783 Srsf5-012 retained_intron Mus_musculus 0 797
ENSMUST00000153056 Srsf5-005 retained_intron Mus_musculus 0 782
ENSMUST00000110351 Srsf5-003 protein_coding Mus_musculus 0 774
ENSMUST00000110354 Srsf5-009 protein_coding Mus_musculus 0 774
ENSMUST00000094693 Srsf5-201 protein_coding Mus_musculus 0 760
ENSMUST00000110356 Srsf5-004 protein_coding Mus_musculus 0 760
ENSMUST00000110352 Srsf5-001 protein_coding Mus_musculus 0 760
ENSMUST00000118024 Gm12966-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000151036 Srsf5-007 retained_intron Mus_musculus 0 477

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