C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5687
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118252 Gm5687-001 ENSMUSG00000080866 10090 + 18:12898427-12899066 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000118252
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000118252 0.105±0.06 0.070±0.02 0.147±0.03 0.448±0.00 0.117±0.00 0.065±0.00 0.070±0.04 0.067±0.00 0.194±0.00 0.177±0.04 0.116±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WS CIL_0005WS_0002 CGP 18:12741324-12941841
CIL_0005WR CIL_0005WR_0002 CGP 18:12755314-12992948
CIL_0008X5 CIL_0008X5_0002 VISTA 18:12809017-13410286

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372209 RPS8-003 protein_coding Homo_sapiens 0 449
ENST00000396651 RPS8-001 protein_coding Homo_sapiens 0 695
ENST00000426177 RPS8P6-001 processed_pseudogene Homo_sapiens 0 196
ENST00000460876 RP11-2F9.3-001 processed_pseudogene Homo_sapiens 0 568
ENST00000462935 RPS8P3-001 processed_pseudogene Homo_sapiens 0 529
ENST00000464658 RPS8-006 processed_transcript Homo_sapiens 0 449
ENST00000470475 RPS8-005 processed_transcript Homo_sapiens 0 250
ENST00000485390 RPS8-004 processed_transcript Homo_sapiens 0 689
ENST00000497035 RPS8-002 processed_transcript Homo_sapiens 0 588

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