C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8661
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118688 Gm8661-001 ENSMUSG00000086225 10090 - 9:100624974-100625965 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainPlacentaTestisENSMUST00000118688
Transcript ID Adipose Bladder Brain Placenta Testis
ENSMUST00000118688 0.029±0.00 0.015±0.00 0.007±0.00 0.219±0.17 0.096±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C8 CIL_0001C8_0002 CGP 9:100552188-100959375
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 841
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 416
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 682
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 832
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 841
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 841
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 414
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 612
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 761
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 638
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 662
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 741
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 497
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 401
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 497
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 577
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 453
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 551
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 368
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 798
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 435
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 682
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 682
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 549
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 233
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 664
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 704
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 407
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 802

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