C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5601
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118909 AC164158.1-001 ENSMUSG00000100153 10090 + 7:119740128-119741099 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118909 4.236±1.67 1.632±0.93 1.237±0.78 3.791±0.93 2.127±1.25 1.041±0.36 2.209±0.30 1.938±0.59 2.466±1.53 2.409±0.76 0.753±0.43 2.236±1.06 0.581±0.36 8.565±1.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312989 PPP1CA-002 protein_coding Homo_sapiens 0 628
ENST00000335007 PPP1CC-001 protein_coding Homo_sapiens 0 1363
ENST00000340766 PPP1CC-002 protein_coding Homo_sapiens 0 1310
ENST00000358239 PPP1CA-006 protein_coding Homo_sapiens 0 544
ENST00000376745 PPP1CA-001 protein_coding Homo_sapiens 0 640
ENST00000526510 PPP1CA-003 retained_intron Homo_sapiens 0 628
ENST00000527663 PPP1CA-007 protein_coding Homo_sapiens 0 311
ENST00000529724 PPP1CA-005 processed_transcript Homo_sapiens 0 202
ENST00000532279 PPP1CA-008 processed_transcript Homo_sapiens 6e-38 161
ENST00000532446 PPP1CA-004 processed_transcript Homo_sapiens 0 628
ENST00000537694 PPP1CA-009 processed_transcript Homo_sapiens 0 481
ENST00000546904 PPP1CC-008 retained_intron Homo_sapiens 0 309
ENST00000546933 PPP1CC-004 protein_coding Homo_sapiens 0 1288
ENST00000550261 PPP1CC-005 nonsense_mediated_decay Homo_sapiens 0 660
ENST00000550991 PPP1CC-010 protein_coding Homo_sapiens 0 1230
ENST00000551582 PPP1CC-007 protein_coding Homo_sapiens 0 213
ENST00000551676 PPP1CC-009 protein_coding Homo_sapiens 0 1062
ENST00000553024 PPP1CC-006 retained_intron Homo_sapiens 0 874
ENST00000620030 PPP1CC-011 non_stop_decay Homo_sapiens 0 497

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