C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11447
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118983 Gm11447-001 ENSMUSG00000081854 10090 + 2:160845613-160846470 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118983
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118983 0.118±0.00 0.009±0.00 0.072±0.01 0.110±0.03 0.055±0.02 0.098±0.07 0.087±0.05 0.123±0.04 0.195±0.11 0.070±0.00 0.257±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AV CIL_0009AV_0002 VISTA 2:160278530-160880585
CIL_0002I4 CIL_0002I4_0002 CGP 2:160731300-160872998
CIL_0004E6 CIL_0004E6_0002 CGP 2:160748708-160906002

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 532
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 488
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 532
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 532
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 532
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 331
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 438
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 377
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 383
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 468
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 388
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 305
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 353
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 470
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 7e-17 94
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 488
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 488
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 248
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 361
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 272
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 189
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 414
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 532

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