C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481866 GAPDHP39-001 ENSG00000239207 9606 + 3:138777832-138778810 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartMuscleOvaryPlacentaTestisENST00000481866
Transcript ID Adipose Adrenal Bladder Colon Heart Muscle Ovary Placenta Testis
ENST00000481866 0.015±0.00 0.228±0.00 0.891±0.00 0.091±0.00 0.027±0.00 0.038±0.00 0.360±0.00 0.162±0.00 0.079±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 664
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 664
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 664
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 664
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 664
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 643
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 643
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 641
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 641
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 638
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 634
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 630
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 597
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 584
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 573
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 556
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000182150 Gm5210-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 521
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 521
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000182170 Gm4819-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000182234 Gm4804-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000182071 Gm9034-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000182757 Gm9658-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000182028 Gm8919-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000184810 Gm11214-001 translated_processed_pseudogene Mus_musculus 0 420
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000182830 Gm8513-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000182081 Gm9162-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000182963 Gm9135-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000182282 Gm17798-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000119237 Gm13668-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000182730 Gm5272-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000182703 Gm26929-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000184252 Gm11214-002 protein_coding Mus_musculus 0 315
ENSMUST00000181006 Gm26875-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000180795 Gm26587-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000118983 Gm11447-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000147954 Gapdh-006 retained_intron Mus_musculus 0 219
ENSMUST00000097296 Gm17199-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000161466 Gm16297-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000121919 Gm14491-001 processed_pseudogene Mus_musculus 3e-28 130

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