C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9308
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119073 Gm9308-001 ENSMUSG00000082793 10090 - 14:123698390-123698603 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENSMUST00000119073
Transcript ID Bladder
ENSMUST00000119073 0.201±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G3 CIL_0004G3_0003 CGP 14:123276641-123975618
CIL_0000WJ CIL_0000WJ_0002 CGP 14:123659971-124677127

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 318
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 318
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 279
ENST00000433415 BTF3P10-001 processed_pseudogene Homo_sapiens 0 285
ENST00000448054 BTF3P6-001 processed_pseudogene Homo_sapiens 8e-26 121
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 254
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 2e-20 102
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 318
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 0 268
ENST00000512257 BTF3-003 retained_intron Homo_sapiens 6e-20 102
ENST00000513224 BTF3P13-001 processed_pseudogene Homo_sapiens 0 272
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 268
ENST00000514505 BTF3-010 processed_transcript Homo_sapiens 0 219
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 246

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