C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3 pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513224 BTF3P13-001 ENSG00000227118 9606 + 4:98740742-98741231 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleTestisENST00000513224
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Testis
ENST00000513224 0.107±0.00 0.084±0.00 0.057±0.00 0.193±0.00 0.233±0.00 0.083±0.00 0.050±0.00 0.026±0.00 0.099±0.00 0.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LO CIL_0008LO_0001 VISTA 4:98355609-98958137

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 619
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 617
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 617
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000139070 Gm7613-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 481
ENSMUST00000058881 Gm5341-201 processed_pseudogene Mus_musculus 0 466
ENSMUST00000191444 RP23-130K20.4-001 processed_pseudogene Mus_musculus 0 331
ENSMUST00000119073 Gm9308-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000189908 RP24-63O23.2-001 processed_pseudogene Mus_musculus 0 220

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