C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP, adenylate cyclase-associated protein, 2 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119341 Cap2-002 ENSMUSG00000021373 10090 + 13:46502125-46649635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000119341
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000119341 37.042±0.00 0.024±0.00 2.481±0.00 0.200±0.10 4.692±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0002 VISTA 13:46271320-46874349
CIL_0008JF CIL_0008JF_0002 VISTA 13:46271337-46874342
CIL_0008B7 CIL_0008B7_0002 VISTA 13:46332291-46935792
CIL_0003RO CIL_0003RO_0002 CGP 13:46418300-46649642
CIL_00081D CIL_00081D_0002 VISTA 13:46435395-47036634
CIL_0003RP CIL_0003RP_0002 CGP 13:46501848-46678056

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003779 IEA actin binding
GO:0007010 IEA cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229922 CAP2-001 protein_coding Homo_sapiens 0 857
ENST00000378990 CAP2-006 protein_coding Homo_sapiens 0 848
ENST00000465994 CAP2-007 protein_coding Homo_sapiens 0 828
ENST00000479291 CAP2-005 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000489374 CAP2-003 protein_coding Homo_sapiens 0 1131
ENST00000493172 CAP2-004 protein_coding Homo_sapiens 0 486
ENST00000557743 CAP2P1-001 transcribed_processed_pseudogene Homo_sapiens 0 466
ENST00000611958 CAP2-201 protein_coding Homo_sapiens 0 787
ENST00000616440 CAP2-202 protein_coding Homo_sapiens 0 791

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