C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119685 Uspl1-004 ENSMUSG00000041264 10090 + 5:149184667-149215430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119685
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119685 3.512±1.96 1.839±1.42 2.028±0.65 3.362±1.02 3.015±0.86 1.253±0.31 1.714±0.84 1.277±0.44 1.622±0.78 3.086±1.08 2.304±0.60 1.704±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UA CIL_0007UA_0002 VISTA 5:149020224-149622595
CIL_0004CF CIL_0004CF_0002 CGP 5:149046702-149215434
CIL_0004CN CIL_0004CN_0003 CGP 5:149184350-149288045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006508 IEA proteolysis
GO:0008283 IEA cell proliferation
GO:0015030 IEA Cajal body
GO:0016926 IEA protein desumoylation
GO:0030576 IEA Cajal body organization
GO:0032183 IEA SUMO binding
GO:0070140 IEA SUMO-specific isopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255304 USPL1-001 protein_coding Homo_sapiens 0 826
ENST00000614860 USPL1-003 protein_coding Homo_sapiens 0 756

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