C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15197
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120526 Gm15197-001 ENSMUSG00000081873 10090 - 10:42330786-42331263 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120526
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120526 0.084±0.00 0.483±0.35 0.086±0.06 0.069±0.04 0.219±0.07 0.640±0.21 0.160±0.00 0.236±0.23 0.106±0.04 0.669±0.27 0.168±0.00 0.247±0.10 0.111±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YH CIL_0008YH_0002 VISTA 10:41950904-42552282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000417250 SNRPCP9-001 processed_pseudogene Homo_sapiens 0 204
ENST00000481033 SNRPCP10-001 processed_pseudogene Homo_sapiens 0 209
ENST00000492453 SNRPCP11-001 processed_pseudogene Homo_sapiens 2.00386e-43 178
ENST00000514820 SNRPCP8-001 processed_pseudogene Homo_sapiens 0 200
ENST00000524498 SNRPCP14-001 processed_pseudogene Homo_sapiens 4.2039e-45 183
ENST00000531775 SNRPCP5-001 processed_pseudogene Homo_sapiens 4.2039e-45 183
ENST00000588011 SNRPCP20-001 processed_pseudogene Homo_sapiens 4.00001e-40 167
ENST00000622868 RP11-90D4.4-001 processed_pseudogene Homo_sapiens 0 209

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