C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear ribonucleoprotein polypeptide C pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531775 SNRPCP5-001 ENSG00000255522 9606 + 11:3531420-3531608 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartOvaryENST00000531775
Transcript ID Breast Heart Ovary
ENST00000531775 3.455±0.00 0.678±0.00 0.414±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058951 Gm8849-201 pseudogene Mus_musculus 1.4013e-45 185
ENSMUST00000071006 Snrpc-001 protein_coding Mus_musculus 1.4013e-45 185
ENSMUST00000120526 Gm15197-001 processed_pseudogene Mus_musculus 4.2039e-45 183
ENSMUST00000175770 Gm8974-001 processed_pseudogene Mus_musculus 5.04467e-44 180
ENSMUST00000119900 Gm12993-001 processed_pseudogene Mus_musculus 5.04467e-44 180
ENSMUST00000173338 Gm2991-001 processed_pseudogene Mus_musculus 5.04467e-44 180
ENSMUST00000191160 RP23-298I7.3-001 processed_pseudogene Mus_musculus 1e-35 152
ENSMUST00000137581 Snrpc-002 retained_intron Mus_musculus 8e-22 106

Loading